|
| We need to act now to ensure global food security, and reduce agricultural greenhouse gas emissions. May 2024. (link) (pdf) |
 | Genetic modification can improve crop yields — but stop overselling it. September 2023. (link) |
| Enhancing sustainable development through plant genetics. August 2023. (link) |
| Genome editing of a rice CDP-DAG synthase confers multipathogen resistance. June 2023. (link) |
 | Plant immunity: Rice XA21-mediated resistance to bacterial infection. February 2022. PNAS. (pdf) |
|
| Sulfotyrosine, an interaction specificity determinant for extracellular protein-protein interactions. July 2022. DOI. 10.1016/j.jbc.2022.102232 (pdf) |
| Divergence among rice cultivars reveals roles for transposition and epimutation in ongoing evolution of genomic imprinting. July 2021. PNAS. 10.1073/pnas.2104445118 (pdf) |
| Targeted DNA insertion in plants. Proceedings of the National Academy of Sciences June 2021, 118 (22) e2004834117; DOI: 10.1073/pnas.2004834117. (pdf) |
| Mechanism and function of root circumnutation. Proceedings of the National Academy of Sciences Feb 2021, 118 (8) e2018940118; DOI: 10.1073/pnas.2018940118. (pdf) |
 | Suppression of rice miR168 improves yield, flowering time and immunity. Nat. Plants 7, 129–136 (2021). https://doi.org/10.1038/s41477-021-00852-x. (pdf) |
| Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass. Nature (2021). https://doi.org/10.1038/s41586-020-03127-1. (pdf) |
 | Crop biotechnology and the future of food. Nature Food volume 1, pages273–283 (2020). (pdf) |
 | Marker-free carotenoid-enriched rice generated through targeted gene insertion using CRISPR-Cas9. Nat Commun 11, 1178 (2020). https://doi.org/10.1038/s41467-020-14981-y (pdf) |
 | The Explorer's Guide to Biology. 2019. (link) |
 | Sub1 rice: Engineering rice for climate change. 2019. Cold Spring Harb Perspect Biol doi: 10.1101/cshperspect.a034637 |
|
| Genome sequence of the model rice variety KitaakeX. BMC Genomics 20, 905 (2019). https://doi.org/10.1186/s12864-019-6262-4 (pdf) |
 | 2019. Genetic Engineering for Disease Resistance in Plants: Recent Progress and Future Perspectives. Plant Physiology, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6501101/ |
 | 2019. Whole-genome sequencing identifies a rice grain shape mutant, gs9-1. Rice, in press. RICE-D-19-00047R1 |
| 4 April 2019. Biosynthesis and secretion of the microbial sulfated peptide RaxX and binding to the rice XA21 immune receptor. PNAS. (link) |
 | 2019. Variation and inheritance of the Xanthomonas gene cluster required for activation of XA21-mediated immunity. Molecular Plant Pathology. Volume 20 (5): 656-672 (link) |
 | 3 October 2018. The biggest hurdle genetically engineered food faces isn't science - it's us. Quartz. (link) |
 | 7 September 2018. A single transcription factor promotes both yield and immunity in rice. Science, 361, 1026-1028. (pdf) |
 | 6 September 2018. A call for science-based review of the European court's decision on gene-edited crops. Nature Biotechnology, 36, 800-802 (pdf) |
| 6 July 2018. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature Biotechnology, 36, 566-569 (pdf) |
| 20 March 2018. Loss of function of a rice TPR-domain RNA-binding protein confers broad-spectrum disease resistance. PNAS, 115, 3174-3179. (link) |
| 20 March 2018. Breeding plant broad-spectrum resistance without yield penalties. PNAS, 115, 2859-2861. (pdf) |
 | Molecular mimicry modulates plant host responses to pathogens (pdf) |
 | “How to Feed the World”. 2017. Axios. |
 | 7 August 2017. WheatNet: a Genome-Scale Functional Network for Hexaploid Bread Wheat, Triticum aestivum. Molecular Plant, 10, 1133-1136. (pdf) |
 | The Sequences of 1,504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies. (pdf) |
 | A microbially derived tyrosine-sulfated peptide mimics a plant peptide hormone. (pdf) |
 | 2016. Twenty Big Questions about the Future of Humanity. Scientific American. |
 | 2016. Moving beyond pro/con debates over genetically engineered crops. (pdf) |
 | An Ecomodernist Manifesto: A manifesto to use humanity's extraordinary powers in service of creating a good anthropocene. 2015. |
 | 2016. Consensus & Controversy in Science: Genes, GMOs & Climate. The Morton L. Mandel Public Lecture. |
 | A Genetic Screen Identifies Two Novel Rice Cysteine-rich Receptor-like Kinases That Are Required for the Rice NH1-mediated Immune Response. PloS Genetics. 12(5): e1006049. doi:10.1371/journal.pgen.1006049 |
| March 24, 2016. Genome-wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-neutron Irradiation. (pdf) |
 | A second-generation expression system for tyrosine-sulfated proteins and its application in crop protection. November 27, 2015. (pdf) |
 | July 3, 2015. The rice immune receptor XA21 recognizes a tyrosine-sulfated protein from a Gram-negative bacterium. |
 | The Phylogenetically-Related Pattern Recognition Receptors EFR and XA21 Recruit Similar Immune Signaling Components in Monocots and Dicots. January 21, 2015. (pdf) |
 | June 12, 2014. How Scare Tactics on GMO Foods Hurt Everybody. (pdf) |
 | 2014. Lab to Farm: Applying Research on Plant Genetics and Genomics to Crop Improvement. (pdf) |
 | Plant Engineers Sow Debate, Scientific American Classics: The Birth of the Great GMO Debate. |
| Boston Review, September 1, 2013. "The Truth about GMOs. (pdf) |
 | August 12, 2012. Would Rachel Carson Embrace "Frankenfoods'? (pdf) |
 | 2012. Genetic engineering and ecologically-based farming. Wired magazine, In Press. |
 | 2011. Plant Genetics, Sustainable Agriculture and Global Food Security. 2011. Genetics 188: 11-20. DOI: 10.1534/genetics.111.128553 (pdf) |
 | "Seeds of Hope" New York Times OpEd. May 15, 2010. |
| 2010. Plant and Animal sensors of conserved microbial signatures. Science. 330:1061-1064. Science Magazine Highlighted Research. |
| 2010. Radically Rethinking Agriculture for the 21st Century. Science 327, 833 (2010) DOI: 10.1126/science.1186834. (pdf) |
 | 2009. Foreign Invaders:The environmental consequences of transgene flow. Harvard International Review. 31(2):58-60. |
 | 2008. What if Organic Farmers joined forces with Genetic Engineers? Conservation Magazine Vol 9:3. Conservation Magazine's overriding goal is to engage the top thinkers and writers of our time in conservation's evolving narrative. |
 | 2008. The new organic: The future of food may depend on an unlikely marriage: organic farmers and genetic engineering. The Boston Globe, March 16, 2008.(pdf) |
 | 2008. Towards A Better Bowl of Rice: Assigning biological function to 60,000 rice genes. Nature Reviews Genetics. 9:91-101. (pdf) |
 | Tomorrow's Table: A marriage of genetic engineering and organic farming. 2008. Oxford University Press. |
| 2004. Food for the Gods. Science 304:1112-1113. (pdf) |
| 1997. Making Rice Disease Resistant. Scientific American, 277:100-105. (pdf) |
| 2002. The Most Precious Things Are Not Jade and Pearls. Science 296, 58-60. (pdf) |
| Full Genome Sequence Analysis of the Model Plant Setaria. Nature Biotechnology, 30, 555-561 (pdf) |
 | 2011. Genetic dissection of the biotic stress response using a genome-scale gene network for rice. PNAS, 108(45) doi: 10.1073/pnas.1110384108 (pdf). |
| 2011. Towards Establishment of a Rice Stress Response Interactome. PLoS Genet 7(4): e1002020. doi:10.1371/journal.pgen.1002020 (pdf). |
 | Cleavage and nuclear localization of the rice XA21 immune receptor. 2012. Nature Communications 3, #920. doi:10.1038/ncomms1 |
| 2012. XAX1 from Glycosyltransferase Family 61 Mediates Xylosyltransfer to Rice Xylan. PNAS 109, # 42, 17117-17122. |
| 2012. Tyrosine sulfation in a Gram-negative bacterium. Nature Communications, Nature Communications 3:1153 (pdf). |
 | Genome sequence analysis of the model grass Brachypodium distachyon: insights into grass genome evolution. 2010. The International Brachypodium Initiative. Nature 463, 763-76. |
| 2006. Plant and Animal Pathogen Recognition Receptors Signal through Non-RD Kinases. PloS Pathogens. 2(1):e2. |
| 2006. A variable cluster of ethylene responsive-like factors regulates metabolic and developmental acclimation responses to submergence in rice. Plant Cell. 18: 1791-1802. |
| 2008. Rice XB15, a protein phosphatase 2C, negatively regulates programmed cell death and XA21-mediated innate immunity. PLoS Biology. 6(9): e23. |
| 2006. Sub1A encodes an ethylene responsive-like factor that confers submergence tolerance to rice. Nature. 442: 705-708. Selected by Faculty of 1000 Biology as one of the most important advances in the field. Awarded CGIAR prize for outstanding scientific article. |
 | 2000. A high-resolution linkage map in the vicinity of the rice submergence tolerance locus Sub1. MGG. 263:681-689. |
| 1998. The rice disease resistance gene, Xa21D, encodes a receptor-like molecule with a LRR domain that determines race specific recognition and is subject to adaptive evolution. Plant Cell 10:765-779. |
| 1997. Evolution of the Rice Xa21 Disease Resistance Gene Family. Plant Cell 9:1279-1287. |
| 1996. A systematic survey reveals the predominance of small inverted repeat elements in wild type rice genes. Proc. Natl. Acad. Sci. 93:8524-8529. |
| 1995. Metaphase and Interphase mapping of the rice genome using bacterial artificial chromosomes. Proc. Natl. Acad. Sci. 92:4487-4491. |
| 1988. Molecular basis for evasion of plant host defence in bacterial spot disease of pepper. Nature 332:541-543. |
| 1995. A receptor kinase-like protein encoded by the rice disease resistance gene Xa21. Science, 270:1804-1806. |
